O-Antigen Description

Serogroup:O65
Serotype H:
Serotype K:
Strain:
Structure:
->2)bDQui3NAc(1->4)aDGalA6N(1->4)aDGalNAc(1->4)bDGalA(1->3)aDGlcNAc(1->
Comment:- Structure [1]
GTs
GT nameDonorAcceptorPosition | Link.NumSimilar to
O065_08

GT NameDonorAcceptorScore / e-value
O121-WbqE


106 / 4e-28
O125-O125_04


97 / 6e-25
O5-O05_12


92 / 3e-23
O116-O116_07


83 / 3e-20
O103-WbtE


80 / 3e-19
GT nameDonorAcceptorPosition | Link.NumSimilar to
O065_10

GT NameDonorAcceptorScore / e-value
O110-O110_03


186 / 2e-57
O27-WejX


112 / 9e-30
O178-O178_05


108 / 8e-29
O153-O153_02


108 / 8e-29
O24-WfaO

aDGlc(1->

->2)bDGlc

101 / 2e-26
O152-WfgE


101 / 3e-26
O85-WfbQ


99 / 2e-25
O81-O081_10


92 / 3e-23
O173-WcmX

aDGlc(1->

->2)bDGlc

91 / 8e-23
O29-WffY


88 / 1e-21
O102-WelN

aDGal(1->

->6)bDGlc

86 / 4e-21
O183-wbaT


85 / 1e-20
O130-WffI


84 / 5e-20
O169-O169_04


84 / 3e-20
O34-O034_11


84 / 3e-20
O104-WbwB

aDGal(1->

->4)aNeu

83 / 8e-20
O66-WfaB


82 / 2e-19
O56-WfaQ


82 / 2e-19
GT nameDonorAcceptorPosition | Link.NumSimilar to
O065_12

GT NameDonorAcceptorScore / e-value
O75-wekY


149 / 4e-43
O89-O089_06


94 / 1e-23
O101-O101_06


92 / 3e-23
O74-O074_11


82 / 1e-19
O103-WbtF


81 / 3e-19
O18-wekW


81 / 3e-19
GT nameDonorAcceptorPosition | Link.NumSimilar to
O065_13

->3)aDGlcNAc

GT NameDonorAcceptorScore / e-value
O178-O178_09


192 / 4e-61
O153-O153_06


192 / 4e-61
O71-WdaK

bDGal(1->

->3)aDGalNAc

187 / 3e-59
O5-O05_15


184 / 6e-58
O174-WbcZ


178 / 2e-55
O107-WclZ

bDGal(1->

->3)aDGalNAc

177 / 2e-55
O104-WbwC

bDGal(1->

->3)bDGalNAc

177 / 3e-55
O117-WbeD

bDGal(1->

->3)aDGalNAc

177 / 4e-55
O33-O033_09


173 / 1e-53
O171-O171_13


171 / 1e-52
O7-WbbD

bDGal(1->

->3)aDGlcNAc

162 / 2e-49
O146-WbwW


161 / 4e-49
O185-O185_03


158 / 8e-48
O112-WfeJ


156 / 3e-47
O160-O160_08


154 / 2e-46
O70-O070_13


149 / 2e-44
O155-WclG


147 / 7e-44
O37-O037_13


147 / 7e-44
O131-O131_11


137 / 7e-40
O63-WbuP


124 / 3e-35
O28-O028ab_02


123 / 1e-34
O54-O054_06


120 / 8e-34
O74-O074_09


115 / 9e-32
O64-O064_03


108 / 3e-29
O127-WbiP


95 / 1e-24
O90-O090_13


95 / 1e-24
O55-WbgO


91 / 3e-23
O55-WbgO


91 / 3e-23
O167-WfdH


91 / 4e-23
O114-WbuP

bDGal(1->

->3)aDGlcNAc

86 / 2e-21
O86-WbnJ

bDGal(1->

->3)aDGalNAc

81 / 9e-20
O86-WcmC

bDGal(1->

->3)aDGalNAc

81 / 1e-19
NMR
1H-NMR5.72 4.11 3.62 3.62 3.62 3.92 3.85 5.08 3.77 4.08 4.51 4.80 4.99 4.18 4.04 4.15 4.40 3.84 3.82 4.85 3.41 3.87 3.18 3.44 1.27 4.43 3.58 3.82 4.41 4.46
Solvent: D2O
Temp: 32C
pD: 2.8
Ref: Acetone 2.225 ppm
Comment: 1H-NMR [1], pD=2.8
13C-NMR95.52 52.43 83.21 69.14 73.22 61.42 100.71 69.62 70.38 77.20 71.55 174.40 99.24 50.55 67.28 77.67 71.88 60.27 103.76 73.73 56.44 73.72 73.73 17.55 104.43 70.67 72.47 77.86 74.22 171.48
Solvent: D2O
Temp: 32C
pD: 2.8
Ref: Acetone 31.07 ppm
Comment: 13C-NMR [1], pD=2.8
Literature
  • First Author: Perry, MB. "Structural characterization of the antigenic O-chain of the lipopolysaccharide of Escherichia coli serotype O65". Carbohydrate Research. 322. (1999), pp 57-66 PubMed: [10629949]