O-Antigen Description

Serogroup:O85
Serotype H:
Serotype K:
Strain:G1189
Structure:
aDGalf(1->4)
          |
   ->2)aDGal(1->3)bDManNAc(1->6)bDGalf(1->3)bDGlcNAc(1->
Comment:- Structure [1]
GTs
GT nameDonorAcceptorPosition | Link.NumSimilar to
WfbQ

aDGal(1->

GT NameDonorAcceptorScore / e-value
O173-WcmX

aDGlc(1->

->2)bDGlc

146 / 8e-42
O27-WejX


136 / 3e-38
O130-WffI


133 / 4e-37
O152-WfgE


133 / 4e-37
O29-WffY


132 / 7e-37
O24-WfaO

aDGlc(1->

->2)bDGlc

132 / 6e-37
O56-WfaQ


125 / 2e-34
O81-O081_10


122 / 2e-33
O144-O144_03


119 / 3e-32
O65-O065_10


96 / 2e-24
O102-WelN

aDGal(1->

->6)bDGlc

93 / 3e-23
O66-WfaB


87 / 3e-21
O183-wbaT


83 / 7e-20
O169-O169_04


83 / 1e-19
O18-wcxD


82 / 2e-19
GT nameDonorAcceptorPosition | Link.NumSimilar to
WfbR

GT NameDonorAcceptorScore / e-value
O167-WfdF


100 / 7e-26
GT nameDonorAcceptorPosition | Link.NumSimilar to
WfbS
GT nameDonorAcceptorPosition | Link.NumSimilar to
WfbU

bDGalf(1->

->3)bDGlcNAc

4 | 1
GT NameDonorAcceptorScore / e-value
O124-WfeT

bDGalf(1->

->3)bDGalNAc

325 / 8e-112
O164-WfeT


325 / 8e-112
O167-WfdK

bDGalf(1->

->3)bDGlcNAc

309 / 8e-106
O170-O170_08


309 / 1e-105
O96-O096_08


272 / 4e-91
O42-WbeY

bDGalf(1->

->3)aDGlcNAc

251 / 5e-83
O28-WbeY

bDGalf(1->

->3)aDGlcNAc

251 / 8e-83
O170-O170_O4


174 / 4e-53
O167-WfdJ


98 / 4e-25
O96-O096_04


90 / 2e-22
NMR
1H-NMR4.96 4.13 4.29 3.86 3.79 3.65 3.65 5.43 3.82 3.82 3.99 4.14 3.76 3.76 4.82 4.58 3.96 3.76 3.44 3.83 3.93 2.05 5.05 4.02 4.04 4.04 3.93 3.70 3.93 4.62 3.86 3.68 3.51 3.51 3.76 3.91 2.07
Solvent: D2O
Temp: 30C
pD:
Ref: TSP 0 ppm
Comment: 1H-NMR [1]
13C-NMR104.30 77.40 74.00 81.70 70.90 64.40 101.50 79.60 69.00 81.40 72.60 61.50 101.30 54.00 79.70 68.00 77.60 61.80 23.50 176.20 109.70 82.60 77.80 84.20 70.40 72.40 104.30 56.50 81.90 69.70 76.90 62.10 23.70 176.50
Solvent: D2O
Temp: 30C
pD:
Ref: Acetone 31.45 ppm
Comment: 13C-NMR [1]
Enzymes
FlippaseMNLKRNGILFYALTILNGLVPLITISFMSRILTSDQLGNYLLSFTIMNVLGMVVDFGISI SGVRTLKKNNLNLTLDEFICSSFLLKFFVFFLVSICYLVFFTYTATEEEMFFIVTLLGVF ITGMDSLWILQVSGDLYKILTKNIIANILYVMMVMLVAYITKDYLSTLILFVIYKLYILL LTINEVRKLYVLSRNNFSIINFISVFKSTAGIAMFRFFALSYTSANGILLNYLTNKYQVA LYLAFEKLNKAILFIATPLTQALLPLFVGGKNNNKLIKYIISIIIISVFILVIGNLLSKE IVGLFIGTRYLNDDTSEFFFYMTIVSPLILLSNAIGMLYFIPCKLDRFLNCIICSAAFIN IICVLYFVHSDVNGALQMARVVAFSELWVTLFMAVVAIIHGRKYGR
Trembl: D8WUJ4
PolymeraseMVVLYFSIILLSSLFFTTSFSFYGLSFYGWLAAFILLLPFVRRVKKGKVFIIILPAISIM SFFLSKGHELDGLINNVKLNGIILITVGAMYLIITSDIMKKIPPKIMSNIIAVVMITHVL IAFFQFVYWYAFGGDLDVSSIFGGSGHRSFYYGIYRITGVFDEPAIYSTFIMSFCFLRFY LMGRNDWVNYVGVVSIILSLSFAGIVIVFLYLLVSETWDKKIIFISIMIFVVCLFVASFY PEIYGSVLTRLETLQAGNDGSSNLKFQYVNFWLSDEQRILFGNGMVGYYDGKPKFFESAF DLTFIFTTITTYGVVLSIPLFLVLYYYLFKGQKRKNQLLLLIISLKMTSIIFPFFWVFSG IIIAYEKNKYSS
Trembl: D8WUJ2
Literature
  • First Author: Perepelov AV. "Structural and genetic characterization of the closely related O-antigens of Escherichia coli O85 and Salmonella enterica O17". Innate Immunity. 17(2). (2011), pp 164-173 PubMed: [20501518]