O-Antigen Description

Serogroup:O41
Serotype H:
Serotype K:
Strain:G3080
Structure:
         bDGlc(1->4)
                  |
->3)aDGal(1->3)aLFuc(1->4)bDGlcNAc(1->3)aLFuc(1->3)bDGlcNAc(1->
Comment:- Structure [1]
GTs
GT nameDonorAcceptorPosition | Link.NumSimilar to
O041_03

GT NameDonorAcceptorScore / e-value
O39-O039_09


116 / 1e-31
GT nameDonorAcceptorPosition | Link.NumSimilar to
O041_04

GT NameDonorAcceptorScore / e-value
O156-O156_06


264 / 1e-87
O84-O084_08


112 / 3e-30
GT nameDonorAcceptorPosition | Link.NumSimilar to
O041_06

GT NameDonorAcceptorScore / e-value
O173-WcmU

aLFuc(->

->4)aDGlc

123 / 3e-35
O168-WfeV


121 / 2e-34
O11-WdaD


97 / 9e-26
O43-O043_13


95 / 1e-24
O11-WdaG


94 / 3e-24
O125-O125_13


94 / 3e-24
O36-O036_08


93 / 4e-24
O184-O184_15


87 / 5e-22
O41-O041_12


86 / 8e-22
O84-O084_13


86 / 2e-21
O159-WfgS


85 / 2e-21
O36-O036_15


85 / 3e-21
O156-O156_14


84 / 4e-21
O168-WfeY


83 / 1e-20
O157-WbdO


83 / 1e-20
O111-WbdL

aDGlc(1->

->4)aDGal

81 / 9e-20
O43-O043_04


81 / 5e-20
GT nameDonorAcceptorPosition | Link.NumSimilar to
O041_12

GT NameDonorAcceptorScore / e-value
O36-O036_15


486 / 0.0
O84-O084_13


481 / 0.0
O159-WfgS


476 / 0.0
O168-WfeY


474 / 0.0
O156-O156_14


472 / 0.0
O11-WdaG


270 / 5e-92
O125-O125_13


270 / 6e-92
O184-O184_15


265 / 6e-90
O43-O043_13


261 / 3e-88
O11-WdaD


129 / 1e-37
O168-WfeV


110 / 2e-30
O43-O043_04


108 / 1e-29
O173-WcmU

aLFuc(->

->4)aDGlc

107 / 5e-29
O111-WbdL

aDGlc(1->

->4)aDGal

94 / 3e-24
O36-O036_08


91 / 3e-23
O41-O041_06


86 / 8e-22
NMR
1H-NMR5.18 3.81 3.85 4.11 4.18 3.66 3.71 5.00 4.04 3.98 4.15 4.44 1.27 4.68 3.74 3.68 3.60 3.54 3.84 3.99 2.04 5.04 3.80 3.99 3.88 4.29 1.16 4.85 3.89 3.69 3.50 3.64 3.75 3.97 2.00 4.59 3.43 3.54 3.63 3.77
Solvent: D2O
Temp: 30C
pD:
Ref: TSP 0 ppm
Comment: 1H-NMR [1]
13C-NMR102.10 69.10 80.80 79.20 72.10 63.00 100.80 69.30 76.50 81.50 69.00 16.60 100.10 57.70 73.80 78.20 76.70 61.20 23.60 176.10 101.00 67.60 78.20 70.60 68.10 16.50 103.00 56.70 81.70 70.20 76.90 62.50 23.70 176.30 104.90 74.70 76.50 73.20 78.00 174.80
Solvent: D2O
Temp: 30C
pD:
Ref: Acetone 31.45 ppm
Comment: 13C-NMR [1]
Literature
  • First Author: Zhu H. "Structure and gene cluster of the O-antigen of Escherichia coli O41". Carbohydrate Research. 349. (2012), pp 86-89 PubMed: [22244340]