O-Antigen Description

Serogroup:O97
Serotype H:
Serotype K:
Strain:
Structure:
bDXulf(2->2)
          | 
   ->3)aLRha(1->3)bLRha(1->
                     |
           bDXulf(2->2)
Comment:- Structure of O-antigen of Yersinia entercolitica O:5,27 [1] which is identical to that of E. coli O97 [1,2].
- O-deacylated structure
- Revision of [3].
- bDXulf=b-D-threo-pent-2-ulofuranosyl
GTs
GT nameDonorAcceptorPosition | Link.NumSimilar to
O097_05

aLRha(1->

GT NameDonorAcceptorScore / e-value
O154-O154_14


141 / 6e-41
O100-O100_10


123 / 4e-34
O10-O010_11


122 / 2e-33
O117-WbeB

aLRha(1->

->4)aDGlc

110 / 1e-29
O180-wfcT


109 / 2e-29
O107-WclX

aLRha(1->

->4)aDGlcNAc

107 / 3e-28
O129-RfbG


105 / 6e-28
O135-RfbG


105 / 6e-28
O13-RfbG

aLRha(1->

->3)bDGlcNAc

105 / 6e-28
O154-O154_12


105 / 6e-28
O105-WbsY


102 / 9e-27
O4-WbuG

aLRha(1->

->6)aDGlc

96 / 1e-24
O49-O049_13


89 / 4e-22
O18-wekT


88 / 1e-21
O34-O034_10


87 / 2e-21
O150-WfgK


84 / 1e-20
GT nameDonorAcceptorPosition | Link.NumSimilar to
O097_06

GT NameDonorAcceptorScore / e-value
O95-O095_05


338 / 1e-118
O97-O097_09


110 / 2e-30
O95-O095_14


103 / 2e-27
O89-O089_15


100 / 2e-26
O92-O092_04


91 / 2e-23
GT nameDonorAcceptorPosition | Link.NumSimilar to
O097_09

GT NameDonorAcceptorScore / e-value
O95-O095_14


125 / 2e-35
O97-O097_06


110 / 2e-30
O95-O095_05


98 / 9e-26
GT nameDonorAcceptorPosition | Link.NumSimilar to
O097_14
GT nameDonorAcceptorPosition | Link.NumSimilar to
O097_16
NMR
13C-NMR105.88 105.75 101.42 98.09 17.51 17.43
Solvent: D2O
Temp: 37
pD:
Ref: Acetone 31.07 ppm
Comment: Partial NMR [1]
Literature
  • First Author: Perry, MB. "Structure of the lipopolysaccharide O-chain of Yersinia enterocolitica serotype O:5,27". Biochemistry and Cell Biology. 65(1). (1987), pp 1-7 PubMed: [3566966]
  • First Author: Thomas, LV. "Antigenic relationships among type strains of Yersinia enterocolitica and those of Escherichia coli, Salmonella spp., and Shigella spp". Journal of Clinical Microbiology. 17. (1983), pp 109-111 PubMed: [6338031]
  • First Author: Gorshkova, RP. "Structural studies on O-specific polysaccharides of lipopolysaccharides from Yersinia enterocolitica serovars O:5 and O:5,27". European Journal of Biochemistry. 156(2). (1986), pp 391-7 PubMed: [2422030]