O-Antigen Description

Serogroup:O11
Serotype H:
Serotype K:
Strain:G1207
Structure:
  ->4)aDGalNAc(1->6)aDMan(1->3)aLFuc(1->3)bDGalNAc(1->
         |
aLFuc(1->3)
Comment:- Structure [1]
GTs
GT nameDonorAcceptorPosition | Link.NumSimilar to
WdaD

->4)aDGal

GT NameDonorAcceptorScore / e-value
O43-O043_04


174 / 8e-55
O11-WdaG


136 / 4e-40
O125-O125_13


136 / 4e-40
O43-O043_13


135 / 7e-40
O36-O036_15


133 / 5e-39
O184-O184_15


133 / 7e-39
O41-O041_12


129 / 1e-37
O159-WfgS


126 / 3e-36
O168-WfeY


125 / 3e-36
O84-O084_13


125 / 4e-36
O156-O156_14


125 / 6e-36
O173-WcmU

aLFuc(->

->4)aDGlc

117 / 4e-33
O168-WfeV


105 / 1e-28
O36-O036_08


100 / 1e-26
O41-O041_06


97 / 9e-26
O111-WbdL

aDGlc(1->

->4)aDGal

91 / 3e-23
O21-WclQ


82 / 3e-20
GT nameDonorAcceptorPosition | Link.NumSimilar to
WdaE

GT NameDonorAcceptorScore / e-value
O29-WffY


82 / 4e-19
GT nameDonorAcceptorPosition | Link.NumSimilar to
WdaF

aDMan(1->

GT NameDonorAcceptorScore / e-value
O125-O125_08


288 / 2e-96
O36-O036_10


284 / 4e-95
O184-O184_10


231 / 8e-75
O43-O043_08


218 / 2e-69
O64-O064_19


108 / 8e-29
O99-WejJ

aDRha(1->

->3)aDRha

105 / 2e-27
O88-O088_12


99 / 2e-25
O9-MtfB

aDMan(1->

->3)aDMan

94 / 2e-23
O187-O187_12


93 / 2e-23
O7-WbbC

aDMan(1->

->4)bDGal

86 / 6e-21
O60-O060_11


85 / 2e-20
GT nameDonorAcceptorPosition | Link.NumSimilar to
WdaG

->4)aDGal

GT NameDonorAcceptorScore / e-value
O125-O125_13


506 / 0.0
O43-O043_13


488 / 0.0
O184-O184_15


381 / 1e-135
O41-O041_12


270 / 5e-92
O159-WfgS


265 / 6e-90
O36-O036_15


265 / 5e-90
O84-O084_13


263 / 3e-89
O168-WfeY


262 / 5e-89
O156-O156_14


261 / 1e-88
O11-WdaD


136 / 5e-40
O43-O043_04


121 / 2e-34
O173-WcmU

aLFuc(->

->4)aDGlc

119 / 1e-33
O168-WfeV


114 / 1e-31
O36-O036_08


111 / 2e-30
O111-WbdL

aDGlc(1->

->4)aDGal

106 / 2e-28
O41-O041_06


94 / 3e-24
O157-WbdO


86 / 2e-21
NMR
1H-NMR5.05 3.94 3.89 3.96 3.52 3.75 3.80 5.00 3.83 3.98 3.83 4.15 1.19 5.10 4.09 3.90 3.92 3.89 3.61 4.08 4.86 4.52 4.13 4.37 4.06 3.75 3.79 5.02 3.76 3.76 3.85 3.98 1.24
Solvent: D2O
Temp: 30C
pD:
Ref: TSP 0 ppm
Comment: 1H-NMR [1]
13C-NMR101.30 53.70 79.80 69.80 77.20 62.40 102.70 68.80 79.20 73.30 68.50 16.70 104.00 71.50 72.10 67.80 73.20 67.00 98.90 50.60 75.90 73.60 72.80 62.20 101.50 69.20 71.30 73.20 69.00 16.80
Solvent: D2O
Temp: 30C
pD:
Ref: Acetone 31.45 ppm
Comment: 13C-NMR [1]
Enzymes
FlippaseMLKNIIYLLSVQGGNYIFPLVTLPYLVRILEPTGYGIYGYSFAVVQYFILFIDYGFNYSA PKIISISRENTDSISKVFWNVTFIKIIAASLGLLIIYLISELNIIDYQIKFIILAYISVV GNLIYPVWFFQGLEKMLGIAISMFSARLLTLCLTFLLVKSEKDLGIAITIQSSITVIAGI ISTYFLFSLKKIIWVPPSLSKMKELIYDGWHYFISSAAISLYTTSSTIILGALSGTTAVG YFIAADKIRLALQGVIGPITQAVFPRVTYIMKDNHDDGLLLARKVFRWQFSLMLVLSIFL YFFADDIILIMYGKTYHESLEILKVLAFTPAIVTVSNYIAILVMIPIGMKKEFTKIITTS GLIGLLIITYLTNEYSGVGTAIGVISTEFIIMARFYFLIKKTNKLNNLNLL
Trembl: E7DWP9
PolymeraseMINRNIKISASFISIIYLPLALLLAMIEMINGARWSVYVCSFMLGVLAFLLIPYENWDLT RHYETYLYVSQTSLNKVFENSDNRYITINTVIYLFKSLGIKKEFLPFFSTFLSYIFYFNI YVNYIKKYNPELSHRCIYLYILISVIPFFAIASSLRQYLAFSIMLYMIVQYFTSENNRYK SQKIIFSAIISCCIHPSAILLLGVFFVSKLIRLNKTILYLIILVLILNHDGLISSLLFQL IRPLLESLGFYFPEYMDSVTIGISNSLLSTNEYILNKIILPSVFFIFTFIYLILFNKKMT RQESQIKNFCSLLLLLICLLSLSPDLFYRFSIFWVLLYSYIFFSYDINKISKLCKHLIFL ILIAACSIINLAQANMGKDIIYVSWCDILYKPSLFLFNKEVKSAEYIRVSQ
Trembl: E7DWQ1
Literature
  • First Author: Li, Y. "Structural and genetic relationships of two pairs of closely related O-antigens of Escherichia coli and Salmonella enterica: E. coli O11/S. enterica O16 and E. coli O21/S. enterica O38". FEMS Immunol. Med. Microbiol.. 61(3). (2011), pp 258-68 PubMed: [21205000]