ECODAB

O-Antigen Description

Serogroup:	O41
Serotype H:
Serotype K:
Strain:	G3080
Structure:	bDGlc(1->4) \| ->3)aDGal(1->3)aLFuc(1->4)bDGlcNAc(1->3)aLFuc(1->3)bDGlcNAc(1->
Comment:	- Structure [1]

GTs

GT name

Donor

Acceptor

Position | Link.Num

Similar to

O041_03

GT Name	Donor	Acceptor	Score / e-value
O39-O039_09			116 / 1e-31

ncbi CAZy

- Reference [2]

GT name

Donor

Acceptor

Position | Link.Num

Similar to

O041_04

GT Name	Donor	Acceptor	Score / e-value
O156-O156_06			264 / 1e-87
O84-O084_08			112 / 3e-30

ncbi CAZy

- Reference [2]

GT name

Donor

Acceptor

Position | Link.Num

Similar to

O041_06

GT Name	Donor	Acceptor	Score / e-value
O173-WcmU	aLFuc(->	->4)aDGlc	123 / 3e-35
O168-WfeV			121 / 2e-34
O11-WdaD			97 / 9e-26
O43-O043_13			95 / 1e-24
O11-WdaG			94 / 3e-24
O125-O125_13			94 / 3e-24
O36-O036_08			93 / 4e-24
O184-O184_15			87 / 5e-22
O41-O041_12			86 / 8e-22
O84-O084_13			86 / 2e-21
O159-WfgS			85 / 2e-21
O36-O036_15			85 / 3e-21
O156-O156_14			84 / 4e-21
O168-WfeY			83 / 1e-20
O157-WbdO			83 / 1e-20
O111-WbdL	aDGlc(1->	->4)aDGal	81 / 9e-20
O43-O043_04			81 / 5e-20

ncbi CAZy

- Reference [2]

GT name

Donor

Acceptor

Position | Link.Num

Similar to

O041_12

GT Name	Donor	Acceptor	Score / e-value
O36-O036_15			486 / 0.0
O84-O084_13			481 / 0.0
O159-WfgS			476 / 0.0
O168-WfeY			474 / 0.0
O156-O156_14			472 / 0.0
O11-WdaG			270 / 5e-92
O125-O125_13			270 / 6e-92
O184-O184_15			265 / 6e-90
O43-O043_13			261 / 3e-88
O11-WdaD			129 / 1e-37
O168-WfeV			110 / 2e-30
O43-O043_04			108 / 1e-29
O173-WcmU	aLFuc(->	->4)aDGlc	107 / 5e-29
O111-WbdL	aDGlc(1->	->4)aDGal	94 / 3e-24
O36-O036_08			91 / 3e-23
O41-O041_06			86 / 8e-22

ncbi CAZy

- Reference [2]

NMR
1H-NMR		5.18 3.81 3.85 4.11 4.18 3.66 3.71 5.00 4.04 3.98 4.15 4.44 1.27 4.68 3.74 3.68 3.60 3.54 3.84 3.99 2.04 5.04 3.80 3.99 3.88 4.29 1.16 4.85 3.89 3.69 3.50 3.64 3.75 3.97 2.00 4.59 3.43 3.54 3.63 3.77
Solvent:	D2O
Temp:	30C
pD:
Ref:	TSP 0 ppm
Comment:	1H-NMR [1]
13C-NMR		102.10 69.10 80.80 79.20 72.10 63.00 100.80 69.30 76.50 81.50 69.00 16.60 100.10 57.70 73.80 78.20 76.70 61.20 23.60 176.10 101.00 67.60 78.20 70.60 68.10 16.50 103.00 56.70 81.70 70.20 76.90 62.50 23.70 176.30 104.90 74.70 76.50 73.20 78.00 174.80
Solvent:	D2O
Temp:	30C
pD:
Ref:	Acetone 31.45 ppm
Comment:	13C-NMR [1]

Literature
First Author: Zhu H. "Structure and gene cluster of the O-antigen of Escherichia coli O41". Carbohydrate Research. 349. (2012), pp 86-89 PubMed: [22244340]