O-Antigen Description

Serogroup:O102
Serotype H:
Serotype K:
Strain:G3100
Structure:
aLRha(1->4)bDGalNAc(1->3)
                       |
                ->4)aDGal(1->6)bDGlc(1->3)bDGalNAc(1->
Comment:- Structure [1]
GTs
GT nameDonorAcceptorPosition | Link.NumSimilar to
WelL

aLRha(1->

->4)bDGalNAc

1 | 4
GT nameDonorAcceptorPosition | Link.NumSimilar to
WelM

bDGalNAc(1->

->3)aDGal

2 | 3
GT NameDonorAcceptorScore / e-value
O130-WffH'


280 / 4e-94
O48-O048_06


203 / 2e-64
O37-O037_11


192 / 3e-60
O128-WbsK

bDGalNAc(1->

->4)aDGal

116 / 9e-32
O55-WbgO


111 / 4e-30
O55-WbgO


111 / 4e-30
O165-WcnW


103 / 2e-27
O113-WbnA


100 / 7e-26
O23-O023_06


99 / 1e-25
O173-WcmW

bDGlc(1->

->3)bDGlcNAc

96 / 1e-24
O125-O125_04


96 / 2e-24
O71-WdaK

bDGal(1->

->3)aDGalNAc

90 / 1e-22
O46-O046_05


90 / 2e-22
O134-O134_05


90 / 2e-22
O38-O038_09


90 / 1e-22
O112-WfeI


89 / 2e-22
O86-WbnJ

bDGal(1->

->3)aDGalNAc

88 / 6e-22
O5-O05_12


88 / 6e-22
O86-WcmC

bDGal(1->

->3)aDGalNAc

87 / 6e-22
O30-O030_06


87 / 1e-21
O46-O046_08


87 / 8e-22
O134-O134_08


87 / 8e-22
O82-O082_09


86 / 2e-21
O86-WbwJ


86 / 2e-21
O32-WfeA


86 / 4e-21
O55-WbgP


84 / 2e-20
O130-WffJ


84 / 7e-21
O55-WbgP


84 / 2e-20
O143-WfdV


84 / 1e-20
O127-WbiP


84 / 8e-21
O90-O090_13


84 / 8e-21
O161-weiG

bDGlcA(1->

->3)bDGlcNAc

84 / 8e-21
O160-O160_08


84 / 1e-20
O102-WelO

bDGlc(1->

->3)bDGalNAc

83 / 2e-20
O182-O182_10


83 / 2e-20
O93-O093_02


81 / 1e-19
O157-WbdN


81 / 1e-19
O81-O081_11


81 / 1e-19
GT nameDonorAcceptorPosition | Link.NumSimilar to
WelN

aDGal(1->

->6)bDGlc

3 | 2
GT NameDonorAcceptorScore / e-value
O130-WffI


231 / 2e-74
O81-O081_10


181 / 3e-55
O27-WejX


169 / 1e-50
O144-O144_03


166 / 1e-49
O152-WfgE


135 / 6e-38
O24-WfaO

aDGlc(1->

->2)bDGlc

124 / 7e-34
O169-O169_04


124 / 2e-34
O56-WfaQ


123 / 8e-34
O173-WcmX

aDGlc(1->

->2)bDGlc

123 / 8e-34
O18-wcxD


117 / 8e-32
O29-WffY


115 / 8e-31
O183-wbaT


114 / 1e-30
O187-O187_10


112 / 6e-30
O66-WfaB


105 / 2e-27
O178-O178_05


100 / 1e-25
O153-O153_02


100 / 1e-25
O85-WfbQ


93 / 3e-23
O65-O065_10


86 / 6e-21
O110-O110_03


84 / 4e-20
GT nameDonorAcceptorPosition | Link.NumSimilar to
WelO

bDGlc(1->

->3)bDGalNAc

4 | 1
GT NameDonorAcceptorScore / e-value
O81-O081_11


267 / 2e-90
O130-WffJ


262 / 8e-89
O27-WejU


246 / 2e-82
O157-WbdN


226 / 2e-74
O21-WclQ


224 / 5e-74
O24-WfaM

bDGlc(1->

->3)bDGalNAc

223 / 2e-73
O46-O046_08


212 / 2e-69
O134-O134_08


209 / 2e-68
O61-WeiL


202 / 7e-66
O140-O140_14


169 / 7e-53
O112-WfeI


164 / 5e-51
O143-WfdV


159 / 1e-48
O38-O038_09


154 / 9e-47
O165-WcnW


143 / 7e-43
O152-WfgD

bDGlc(1->

->3)bDGlcNAc

141 / 5e-42
O30-O030_06


138 / 6e-41
O91-WbsA


132 / 1e-38
O161-weiG

bDGlcA(1->

->3)bDGlcNAc

131 / 3e-38
O182-O182_10


128 / 6e-37
O173-WcmW

bDGlc(1->

->3)bDGlcNAc

126 / 3e-36
O82-O082_09


123 / 3e-35
O93-O093_02


120 / 4e-34
O79-WbdX


118 / 2e-33
O56-WfaP

bDGlc(1->

->3)bDGlcNAc

117 / 1e-32
O55-WbgP


106 / 8e-29
O55-WbgP


106 / 7e-29
O128-WbsK

bDGalNAc(1->

->4)aDGal

94 / 2e-24
O66-WfaC


90 / 6e-23
O113-WbnA


82 / 3e-20
NMR
1H-NMR4.95 3.72 3.95 4.42 3.96 3.69 3.69 4.63 3.30 3.50 3.62 3.63 3.76 4.02 5.01 4.06 3.73 4.18 3.58 3.79 3.79 5.19 4.16 3.78 3.47 3.75 1.30 4.59 4.10 3.87 4.06 3.75 3.79 3.79
Solvent: D2O
Temp: 30C
pD:
Ref: TSP 0 ppm
Comment: 1H-NMR [1]
13C-NMR99.60 68.80 81.10 76.80 71.50 61.90 105.80 74.20 76.80 70.00 75.30 66.30 102.40 52.30 82.70 69.00 76.20 62.20 103.00 71.50 71.70 72.90 70.80 17.90 105.20 53.80 72.90 76.20 76.20 62.90
Solvent: D2O
Temp: 30C
pD:
Ref: Acetone 31.45 ppm
Comment: 13C-NMR [1]
Enzymes
FlippaseMPALGYIARELGAERFGLFVLCTAIVGYASIFDAGLTRAVIREIAFNRTNKSELNKIIAT SNFAIIILGLVGAALLFMNIDNLVSLLKVSPRYKDDVVSSFKILTITIPLFLLNQIFVSY LEGMEDFFNINIQRCISSSLVAGLPAFFIILHPTLTCAMIGLVCGRMVSLIISYYCAKEI VLTAGIRFHKQVLFRLLKFGGWITVSNIISPVMSYFDRFILSNLLGAKSVGFYIAPSEFI NRLINIPWALARALFPKLSAAKTLSERKKNETIAYIMLSMVCIPAVIIGVGLSYTILNIW LGKEYAENSTYILQVLLIGFLFNSYAQIPFATIQAAGKAKITALIHCIEIIPYLVGLYFF IIHFGVIGAAYAWTIRVSLDFVILLVASRGIYKSW
Trembl: AFS33312.
PolymeraseMNENQINKQRSGKYLTAFLCCAFLSINSLAINPAYIYGAGLLSIIIMLIFVKAKISKFSM VTIIFAFAILLCQVIGIYYKTQTTGYPEAPNYITPFLFFYSMVISVGVNEVFMVLNYDTR IKCYKNFLMFFVMFMFLELITRVIIGNLSEGILYAFKKSLFYFDSNFTALIDISILGFLL FLKNNKIYNFKYTRYITYILLFLTMSRAAMVTLLAMLYVLNNKAKIGKRSALVFLFVICV FIYMSISHLFENSNYSNIDGSFNSKFYIISQAFEFYTTQSLMTHMFGVGLGNTEQLLGIF AHNIYVTLVLEFGFIGSFLFITFIFYSLKKTNFNSLYIWLPVCISGISLFGAYSPFLFIL NAVIYNETRYLGNQKL
Trembl: AFS33314.1
Literature
  • First Author: AV Perepelov. "Structure and gene cluster of the O-antigen of Escherichia coli O102". Carbohydrate Research. 361. (2012), pp 73-77 PubMed: [22982615]