O-Antigen Description

Serogroup:	O38
Serotype H:
Serotype K:
Strain:	F11621-41
Structure:	aDGlcNAc(1->4) \| ->6)bDGlcNAc(1->3)bDGalNAc(1->4)bDGlcA(1->3)bDGalNAc(1->
Comment:	- Structure [2]

GTs

GT name

Donor

Acceptor

Position | Link.Num

Similar to

O038_03

GT Name	Donor	Acceptor	Score / e-value
O81-O081_09			111 / 2e-30
O182-O182_09			86 / 2e-21
O170-O170_05			82 / 4e-20

ncbi CAZy

- Reference [1]

GT name

Donor

Acceptor

Position | Link.Num

Similar to

O038_06

bDGlcNAc(1->

GT Name	Donor	Acceptor	Score / e-value
O18-wekU	bDGlcNAc(1->	->3)aDGal	144 / 2e-42
O142-O142_11			141 / 2e-41
O3-WclU			135 / 3e-39
O23-O023_03			90 / 1e-22

ncbi CAZy

- Reference [1]

GT name

Donor

Acceptor

Position | Link.Num

Similar to

O038_07

GT Name	Donor	Acceptor	Score / e-value
O82-O082_07			198 / 2e-64
O23-O023_05			144 / 8e-44
O124-WfeR			92 / 7e-24
O164-WfeR			91 / 1e-23

ncbi CAZy

- Reference [1]

GT name

Donor

Acceptor

Position | Link.Num

Similar to

O038_09

bDGlcA(1->

->3)bDGalNAc

GT Name	Donor	Acceptor	Score / e-value
O143-WfdV			301 / 5e-104
O140-O140_14			292 / 1e-100
O112-WfeI			240 / 4e-80
O134-O134_08			197 / 9e-64
O93-O093_02			196 / 5e-63
O46-O046_08			195 / 9e-63
O30-O030_06			191 / 4e-61
O152-WfgD	bDGlc(1->	->3)bDGlcNAc	183 / 5e-58
O91-WbsA			177 / 7e-56
O130-WffJ			172 / 8e-54
O161-weiG	bDGlcA(1->	->3)bDGlcNAc	172 / 1e-53
O182-O182_10			172 / 1e-53
O27-WejU			172 / 1e-53
O21-WclQ			171 / 2e-53
O79-WbdX			166 / 1e-51
O157-WbdN			166 / 3e-51
O82-O082_09			164 / 5e-51
O24-WfaM	bDGlc(1->	->3)bDGalNAc	159 / 8e-49
O165-WcnW			155 / 1e-47
O102-WelO	bDGlc(1->	->3)bDGalNAc	154 / 9e-47
O81-O081_11			153 / 3e-46
O61-WeiL			150 / 2e-45
O173-WcmW	bDGlc(1->	->3)bDGlcNAc	147 / 3e-44
O56-WfaP	bDGlc(1->	->3)bDGlcNAc	110 / 3e-30
O169-O169_03			94 / 3e-24
O183-wbaS			93 / 7e-24
O55-WbgP			88 / 3e-22
O55-WbgP			88 / 3e-22
O128-WbsK	bDGalNAc(1->	->4)aDGal	88 / 3e-22
O32-WfeA			87 / 7e-22
O18-wekT			87 / 5e-22
O34-O034_10			85 / 5e-21
O117-WbeA			84 / 7e-21
O102-WelM	bDGalNAc(1->	->3)aDGal	84 / 1e-20
O107-WclW			82 / 2e-20
O112-WfeF			81 / 9e-20
O113-WbnA			81 / 1e-19
O185-O185_07			80 / 2e-19

ncbi CAZy

- Reference [1]

Enzymes
Flippase		MKKYLSNLLWLLSDRVFMLVFQLSLFASIKRIYGLDILGSWATIMNISQILLSLFLFGID IVVVKRIVENPSSTGTEIGCALFLQFLGLLLYASAFITIVIYFYYDIPFAFIFVAILIVA NFFSLYAKVIFFHYSALVESKYRAITILSSVAVSYGYLWCCIYFGWHVFYAYVFFYLIQA LFSFTIYKFYFPYSAKWTIDLELVKMYFFMGSKLIVSTISVSLFTQCDVILLESLTGTKE AGAFSAALRLSAIWFMCGGLIANAFFPKIVQLEKIGEEESFIFLKWICGVVSVISIYGAI IMIALSPIIIKILYGDNMDLSAQVLMVHMWSGVFVFLGSFSSKWLFSKNYINLEVIKTII AAILNITLNIIVIPKYGAVGAASVSLLSYFIANFLIFIFIPKTKNMFKMQLQSLKYIIFP WRLINDFGRVRCQFQ
Trembl:	A0A0A8J389
Polymerase		MNIYKNSNENSLSNNNCIVYFIPLLLLATFFFPLVVLIFIGALSPLLHPVLRNFYFYALL VFIIIFFSTLKPFGDIAEYLHVYHELNYNLIDVFGYSRFGDGLEFMFLAIMKFIGYISGG NDEVFLLSTYFLIVFFLSKILKDVDKKYKLFLLSLFFFNLGFIEVTSYFLRQVLSVVVFL YAINERSFKKYIFFLLSVFFHMSAVVNVFIYAVYMIFGSKKYSYAKIVFSILIGLLVVFF VVYNTPIYSVLLSKFTSVSGNDKFTRLPLNYIIITVVNICFIIMIGKRSKCDDFNKILFC KECFLFLILLPFPALSNRLGMIIFGFYPYFILPYLKAFERKGKSKYALLICLYVVNLVPF LYLMYNVSLGNNMFTFLNNHPFTEGVYGMIDYILEAIDKGVNYINEGN
Trembl:	A0A0A8J4E7

Literature
First Author: Iguchi A. "A complete view of the genetic diversity of the Escherichia coli O-antigen biosynthesis gene cluster". DNA Research. 22. (2015), pp 101-107 PubMed: [25428893]
First Author: Knirel YA. "Structural Relationships Between Genetically Closely Related O-Antigens of Escherichia coli and Shigella spp.". Biochemistry (Mosc). 81. (2016), pp 600-608 PubMed: [27301288]