O-Antigen Description

Serogroup:O54
Serotype H:
Serotype K:
Strain:
Structure:
->4)aDGalA(1->2)aLRha(1->2)bDRibf(1->4)bDGal(1->3)bDGlcNAc(1->
Comment:
GTs
GT nameDonorAcceptorPosition | Link.NumSimilar to
O054_06

bDGal(1->

->4)aDGal

GT NameDonorAcceptorScore / e-value
O63-WbuP


246 / 8e-82
O114-WbuP

bDGal(1->

->3)aDGlcNAc

239 / 5e-79
O64-O064_03


235 / 9e-78
O92-O092_07


187 / 6e-59
O74-O074_09


170 / 2e-52
O160-O160_08


124 / 6e-35
O65-O065_13


120 / 8e-34
O107-WclZ

bDGal(1->

->3)aDGalNAc

114 / 3e-31
O171-O171_13


113 / 6e-31
O117-WbeD

bDGal(1->

->3)aDGalNAc

111 / 2e-30
O104-WbwC

bDGal(1->

->3)bDGalNAc

109 / 1e-29
O33-O033_09


108 / 3e-29
O146-WbwW


107 / 5e-29
O185-O185_03


107 / 6e-29
O167-WfdH


105 / 3e-28
O71-WdaK

bDGal(1->

->3)aDGalNAc

104 / 6e-28
O112-WfeJ


103 / 1e-27
O5-O05_15


103 / 2e-27
O37-O037_13


102 / 4e-27
O174-WbcZ


101 / 1e-26
O70-O070_13


101 / 7e-27
O128-WbsK

bDGalNAc(1->

->4)aDGal

99 / 8e-26
O127-WbiP


95 / 1e-24
O90-O090_13


95 / 1e-24
O7-WbbD

bDGal(1->

->3)aDGlcNAc

94 / 4e-24
O178-O178_09


93 / 7e-24
O153-O153_06


93 / 7e-24
O55-WbgO


92 / 2e-23
O155-WclG


92 / 2e-23
O55-WbgO


92 / 2e-23
O86-WbnJ

bDGal(1->

->3)aDGalNAc

91 / 3e-23
O23-O023_06


91 / 3e-23
O86-WbwJ


89 / 1e-22
O86-WcmC

bDGal(1->

->3)aDGalNAc

89 / 2e-22
O28-O028ab_02


89 / 2e-22
O125-O125_04


87 / 1e-21
O131-O131_11


83 / 2e-20
O5-O05_12


81 / 1e-19
GT nameDonorAcceptorPosition | Link.NumSimilar to
O054_07

GT NameDonorAcceptorScore / e-value
O35-WcnX


126 / 3e-36
O120-O120_13


95 / 1e-24
O105-WbsV


92 / 9e-24
GT nameDonorAcceptorPosition | Link.NumSimilar to
O054_10

aLRha(1->

->4)bDGal

GT NameDonorAcceptorScore / e-value
O146-WbwV


214 / 6e-69
O133-O133_07

aLRha(1->

->2)aLRha
->4)aDGalA

150 / 2e-44
O147-WfbY


146 / 5e-43
O120-O120_14


140 / 1e-40
O19-O019_09


136 / 4e-39
O69-O069_11


135 / 1e-38
O10-O010_09


132 / 1e-37
O148-WbbQ


131 / 2e-37
O19-O019_08


130 / 5e-37
O35-WcnY


125 / 3e-35
O129-RfbF


124 / 9e-35
O135-RfbF


124 / 1e-34
O13-RfbF


124 / 9e-35
O150-WfgI


123 / 2e-34
O71-WdaM

aLRha(1->

->4)bDGal

107 / 1e-28
O2-wegQ

aLRha(1->

->3)aLRha
->2)aLRha

105 / 4e-28
O50-O050_12


105 / 4e-28
NMR
1H-NMR5.05 3.72 4.05 4.42 4.88 5.07 4.07 3.89 3.47 3.77 1.30 5.44 4.22 4.24 4.01 3.66 3.83 4.44 3.50 3.74 3.99 3.71 3.73 3.73 4.70 3.80 3.78 3.52 3.38 3.73 3.86
Solvent: D2O
Temp: 40C
pD:
Ref: TSP 0.0 ppm
Comment:
13C-NMR99.3 69.4 70.4 80.0 72.1 174.5 99.7 77.7 70.6 73.2 70.7 17.8 108.1 82.2 71.3 83.9 63.8 104.7 72.1 74.1 76.8 76.0 62.5 103.1 56.1 83.6 69.9 76.3 62.3
Solvent: D2O
Temp: 40C
pD:
Ref: TSP -1.6 ppm
Comment:
Literature
  • First Author: O I Naumenko. "Structure and gene cluster of the O-antigen of Escherichia coli O54". Carbohydrate Research. 34-38. (2018), pp 34-38 PubMed: [29660546]