O-Antigen Description

Serogroup:O80
Serotype H:
Serotype K:
Strain:E71
Structure:
aLFuc(1->2)                          aLFuc(1->4)
         |                                    |
  ->6)bDGlc(1->3)bDGalNAc(1->4)bDGlcA(1->3)bDGlcNAc(1->
Comment:
GTs
GT nameDonorAcceptorPosition | Link.NumSimilar to
O080_09

GT NameDonorAcceptorScore / e-value
O55-WbgN


84 / 8e-21
O55-WbgN

aCol(1->

->2)bDGal

84 / 8e-21
GT nameDonorAcceptorPosition | Link.NumSimilar to
O080_10

GT NameDonorAcceptorScore / e-value
O125-O125_04


97 / 5e-25
GT nameDonorAcceptorPosition | Link.NumSimilar to
O080_11
GT nameDonorAcceptorPosition | Link.NumSimilar to
O080_13
NMR
1H-NMR4.62 3.43 3.67 3.45 3.50 3.84 4.04 4.48 3.91 3.89 4.08 3.74 3.80 4.59 3.26 3.63 3.72 3.73 5.25 3.78 3.67 3.74 4.20 1.20 4.57 3.97 4.03 3.71 3.56 3.87 3.99 4.98 3.77 3.75 3.74 4.71 1.17
Solvent: D2O
Temp: 40C
pD:
Ref: TSP 0.0 ppm
Comment:
13C-NMR102.8 79.0 77.9 70.7 75.5 69.3 103.2 52.4 77.9 69.1 76.1 62.0 102.3 56.6 78.4 74.2 76.7 61.1 100.2 69.3 70.7 72.9 67.8 16.3 99.4 69.3 70.3 73.1 67.5 16.5
Solvent: D2O
Temp: 40C
pD:
Ref: TSP -1.6 ppm
Comment:
Enzymes
FlippaseMSKFIILFARGYEVLIAFCLLKLMSDFLSPLEYAQLNLFVAITQGIALFFISPLQNWILV NNDNIACEIGLNSTILFEFIYSSAISVVACLLLIISGTHHELINAGILYLFILAVITPVL SQTVIPILNLQGKIIQFAGLSILGATLGIIIPVSFVSLYKDDFEAWLLGGVIAQLLVIII GLFIGNHSQSLGLFLGLKKIPYRKIFVFSLPLCVAIGFQWYNAQGFRLSLQTVVDLKTLG AFIMGFGFGGKFLNAIEKVFSTVLLPQLYNRKKDSSIKKEWLIYIFKMSAIYSVATFVII LLSQKIYPIIISEKYAEGQKYIVAGVIFDMFRCMQNAVYQYNLIVSKNHIQLIMNMCITL FVFAFIYFINKYQLEFSYFVMMLPVVMGAITLISFIRNY
Trembl: A0A0B1A9A3
PolymeraseMTSLRLKDSFFIFILLVITSKYMIFSILPIGNVINVLACMLSLFLLFRRRFIVKIKSTTQ KLGCIFFILSLLLFNISKFSNELTLFNAIIPTGLIMVFMVLIPLAFDKFDLIDALKKYSV FNFWLLVLGLTLYFLNLLGFLGASSLVAAADHANQDGYVSLLNLAYYPSWINIKVSSFII HRFSGVFWEPGTLGLYLIFLITIEIILFEHEKLGSKIRIFVFILSGVASLSLLFFVSVVV LYFFHLVSQKKDRKTLLAYSLLICILTFICVYYYDYLYQAVLYRLDFDTQRGFVGNTRSG VVFEFWNQFSSGGLLSQLIGFGPYSKFEGDSTSIMIKIYQRGILGFIFLFLSFVCFSLKS SKLFFMPAWILALIILSQFEGAIFLVMMMLFSILCKY
Trembl: A0A0B1A5U9
Literature
  • First Author: SN Senchenkova. "Structure elucidation and gene cluster characterization of the O-antigen of Escherichia coli O80 ". Carbohydrate Research. 432. (2016), pp 83-87 PubMed: [27454490]