O-Antigen Description

Serogroup:O73
Serotype H:
Serotype K:
Strain:P12a G1057
Structure:
         aDGlc(1->4)
                  |
->6)aDMan(1->2)aDMan(1->2)bDMan(1->3)aDGlcNAc(1->
                             |
                    aDGlc(1->3)
Comment:- Structure [1]
GTs
GT nameDonorAcceptorPosition | Link.NumSimilar to
WbaC

aDMan(1->

->2)bDMan

1 | 2
GT NameDonorAcceptorScore / e-value
O77-WbaC

aDMan(1->

->2)DMan

674 / 0.0
O106-WbaC


672 / 0.0
O44-O044_02


641 / 0.0
O17-O017_02


641 / 0.0
O176-O176_06


192 / 1e-59
GT nameDonorAcceptorPosition | Link.NumSimilar to
WbaD

bDMan(1->

->3)aDGlcNAc

2 | 1
GT NameDonorAcceptorScore / e-value
O106-WbaD


704 / 0.0
O77-WbaD

bDMan(1->

->3)aDGlcNAc

704 / 0.0
O44-O044_03


649 / 0.0
O17-O017_03


649 / 0.0
O179-O179_08


381 / 4e-133
O62-O062_12


372 / 2e-129
O6-Orf7


350 / 7e-121
O59-WclC


241 / 4e-78
O176-O176_05


86 / 8e-21
NMR
1H-NMR5.15 4.12 3.89 3.99 3.98 3.60 4.12 5.35 4.09 4.30 3.94 3.85 3.78 3.87 4.89 4.03 3.95 3.53 3.76 3.78 3.87 5.24 3.56 3.65 3.43 3.76 3.78 3.87 5.23 3.58 3.54 3.43 3.76 3.78 3.87
Solvent: D2O
Temp: 27C
pD:
Ref: Acetone 2.225 ppm
Comment: 1H-NMR [1]
13C-NMR102.90 71.50 77.00 67.30 72.90 66.30 99.30 78.20 71.70 77.20 73.20 62.00 101.10 74.80 81.60 68.30 78.00 62.30 98.30 54.40 81.40 70.10 73.20 62.00 101.40 73.40 74.50 70.80 74.20 62.00 101.90 72.70 74.70 70.90 74.20 62.00
Solvent: D2O
Temp: 27C
pD:
Ref: Acetone 31.45 ppm
Comment: 13C-NMR [1]
Enzymes
FlippaseMIKEIFSDGIFSLFNKICYFGFKTLAIILITRSLGEDVGGEFIFLVGFLEVLRVVTDFGVDLFVIKKYND STDKIKLLNVTFAQKILSGVIVLLLFCLYSFVQGYQYNVYIPIVLALPVALFFNFSNSYFQSLNSNKSLT FPIAIASIATCTIFAIQYFFNVKFNAWDYLCVELLFVSLVTLKLFVSVKFRFIRTSAFDVLMSILSLYKY TLSIGLTAVVVIIYSRIDNFYLKTFAPGDLAAYGQIFRMVDPLVMVSSVFSTVAYARFCRINLQEKNTFT KVFQFLLCIVAYGVLSSLVYFFIIKYLGHFVLISNVNNDFLIMMFLIVACVKCINGGTTAIIQSQGFYKV GLYVSYVCILTSIPTMYFLIMKYGVKGAAMTILLVECISFILLLCSFFMIKKMRP
Trembl: Q1L823
PolymeraseMHKQYYLLLCNKIQFKHLAIYFSVFLSLSSCFLWGGADTFVSQVYIDILATISTALLVILMFYYYINRVR YLSLTLLFAFVFSLIIGLPSIYLYYFKNANHGFEIICIWGMLINSILYLQTTETVIKEEKRYLTSLFYIL FSIVALCQLYKILIYLMFILNSGEGHLAIYTESEELLSQVPFFIRAISGFAVVMSLSTFYFKTPTYIKVI AFVLLASDLAIGIRNKFFFSVICIFILYMYSNEYRVRNLFKQLSKPIFLIAGFLCFSMVSYFREGYQIDF MIYIGIVLDSLSSTLGGMQNLFDMQSSGWDQLHPAVVFTQVLPLSGLGFLDDQQIAKDFSIIVLGDVSSG IALSSSGLLESSLLSLNLGVIIYLLYLSGVMLFIKWGLNNQRIIINFVAISMISGFFYAVRGELILPLAF LLKSLPIVLISPLLVKNKIYHGQ
Trembl: Q1L824
Literature
  • First Author: Wang W. " A group of Escherichia coli and Salmonella enterica O antigens sharing a common backbone structure". Microbiology. 153(7). (2007), pp 2159-67 PubMed: [17600060]