O-Antigen Description

Serogroup:O55
Serotype H:7
Serotype K:
Strain:
Structure:
            ->6)bDGlcNAc(1->3)aDGal(1->3)bDGalNAc(1->
                   |
aCol(1->2)bDGal(1->3)
Comment:- Structure [1]
GTs
GT nameDonorAcceptorPosition | Link.NumSimilar to
WbgM

aDGal(1->

->3)bDGalNAc

1 | 1
GT NameDonorAcceptorScore / e-value
O55-WbgM


568 / 0.0
O128-WbsH

aDGal(1->

->3)bDGalNAc

390 / 3e-137
O110-O110_02


322 / 2e-110
O69-O069_12


246 / 6e-81
O18-wekW


244 / 9e-80
O113-WbnE


242 / 5e-79
O3-WclR


224 / 4e-72
O40-WffO


220 / 1e-70
O148-WbbG

aDGlc(1->

->3)aDGlcNAc

149 / 1e-43
O19-O019_11


148 / 2e-43
O51-O051_12


147 / 4e-43
O87-WfgO


132 / 3e-37
O120-O120_15


132 / 3e-37
O22-WbhP


117 / 1e-31
O76-O076_08


105 / 8e-28
O111-WbdM

aCol(1->

->3)aDGlc ->6)aDGlc

100 / 3e-26
O142-O142_03


98 / 4e-25
O121-WbqH


87 / 1e-21
O89-O089_06


87 / 2e-21
O86-WbnH


86 / 5e-21
O86-WbwH


86 / 5e-21
O86-WcmA

aDGalNAc(1->

->3)bDGalNAc

86 / 6e-21
O127-WbiN


86 / 5e-21
O90-O090_04


86 / 5e-21
O101-O101_06


82 / 1e-19
O116-O116_10


82 / 8e-20
ncbi CAZy
- Reference [3]
GT nameDonorAcceptorPosition | Link.NumSimilar to
WbgN

aCol(1->

->2)bDGal

2 | 4
GT NameDonorAcceptorScore / e-value
O55-WbgN


600 / 0.0
O126-WbgL


196 / 9e-62
O128-WbsJ

aLFuc(1->

->2)bDGal

157 / 4e-47
O127-WbiQ


123 / 2e-34
O90-O090_14


123 / 2e-34
O86-WbwK

aLFuc(1->

->2)bDGal

120 / 4e-33
O86-WbnK

aLFuc(1->

->2)bDGal

119 / 5e-33
O86-WcmD

aLFuc(1->

->2)bDGal

119 / 5e-33
ncbi CAZy
- Reference [3]
GT nameDonorAcceptorPosition | Link.NumSimilar to
WbgO

bDGal(1->

->3)aDGal

GT NameDonorAcceptorScore / e-value
O55-WbgO


543 / 0.0
O23-O023_06


143 / 2e-42
O126-WbsT


139 / 8e-41
O127-WbiP


137 / 4e-40
O90-O090_13


137 / 4e-40
O86-WbnJ

bDGal(1->

->3)aDGalNAc

135 / 2e-39
O86-WbwJ


135 / 3e-39
O86-WcmC

bDGal(1->

->3)aDGalNAc

135 / 2e-39
O128-WbsK

bDGalNAc(1->

->4)aDGal

134 / 1e-38
O113-WbnA


122 / 6e-34
O74-O074_09


111 / 2e-30
O48-O048_06


108 / 6e-29
O167-WfdH


107 / 9e-29
O125-O125_04


106 / 3e-28
O102-WelM

bDGalNAc(1->

->3)aDGal

101 / 1e-26
O178-O178_09


99 / 5e-26
O153-O153_06


99 / 5e-26
O71-WdaK

bDGal(1->

->3)aDGalNAc

96 / 1e-24
O114-WbuP

bDGal(1->

->3)aDGlcNAc

92 / 2e-23
O54-O054_06


92 / 2e-23
O65-O065_13


91 / 3e-23
O92-O092_07


91 / 3e-23
O114-WbuM


90 / 8e-23
O63-WbuP


89 / 2e-22
O160-O160_08


89 / 1e-22
O64-O064_03


88 / 3e-22
O146-WbwW


87 / 1e-21
O104-WbwC

bDGal(1->

->3)bDGalNAc

84 / 8e-21
O173-WcmW

bDGlc(1->

->3)bDGlcNAc

83 / 1e-20
O70-O070_13


83 / 2e-20
O171-O171_13


81 / 1e-19
O165-WcnW


81 / 8e-20
ncbi CAZy
- Reference [3]
GT nameDonorAcceptorPosition | Link.NumSimilar to
WbgP

->3)bDGalNAc

GT NameDonorAcceptorScore / e-value
O55-WbgP


513 / 0.0
O140-O140_14


107 / 4e-29
O102-WelO

bDGlc(1->

->3)bDGalNAc

106 / 7e-29
O157-WbdN


102 / 2e-27
O173-WcmW

bDGlc(1->

->3)bDGlcNAc

102 / 3e-27
O165-WcnW


102 / 1e-27
O66-WfaC


101 / 6e-27
O24-WfaM

bDGlc(1->

->3)bDGalNAc

101 / 4e-27
O161-weiG

bDGlcA(1->

->3)bDGlcNAc

99 / 4e-26
O152-WfgD

bDGlc(1->

->3)bDGlcNAc

97 / 1e-25
O182-O182_10


97 / 2e-25
O112-WfeI


96 / 3e-25
O149-WbuU


92 / 8e-24
O93-O093_02


90 / 4e-23
O130-WffJ


89 / 7e-23
O81-O081_11


89 / 1e-22
O38-O038_09


88 / 3e-22
O130-WffH'


86 / 2e-21
O61-WeiL


85 / 2e-21
O79-WbdX


84 / 5e-21
O134-O134_08


84 / 6e-21
O30-O030_06


83 / 1e-20
O46-O046_08


83 / 1e-20
O160-O160_04


83 / 2e-20
O143-WfdV


81 / 9e-20
O46-O046_05


81 / 7e-20
O134-O134_05


81 / 7e-20
ncbi CAZy
- Reference [3]
NMR
13C-NMR100.60 34.90 17.40 102.40 103.30 56.60 97.10 103.70 52.40
Solvent: D2O
Temp: NULL
pD:
Ref: Not Stated NULL ppm
Comment: 13C-NMR [1]. External TMS
Enzymes
FlippaseMIKKMFSSGFIKNGISNYICVAWMGGVSIIVLPYYLHILGPQQWGIVAICISIQSLMYLA DAGMSQIMPRDIARCNGKSRELYVIYKSFLHAYSLLAIIVFSLILVGSYFIIDFWLVLDF SLKKEVFICVVLLGLQFLFQFPNNANIGYWNGTLQQHKSNIRQCFFFTLKHIVAICLVTK WPQAILYQSGFLLIAFLESTSNTIKILFSFDGNIKRQEKLSIGINKIFRESGVLSIAVAI GLLVTQLDRIVLSKYVDISDFGYYVLASTLAQYFLQLQYPLLRLFFPRLTVALNKQNILR LLYSIIIFCVFPCLIMVLISPFFLSLWLDNAEAESIIIWPLRLILIAIAINSIYNIIYQI MLIKQKAIVILCINISSLLCVFPTIWLLSTRVGVLAGGIGWVLCSLIQLFISLLWLFKRK ESILL
Trembl: Q8VQ44
PolymeraseMFNKKYVVIIWGGVLSLLCSLPLSIQGGFDDSLVYYEQAIYIWNNGLLEGLSSIYHQTNK FEIGMGLFFYLQGFLGEGRFVFILLNLFLVNFLAVLIYLKINDEVRISPSLLCVTLMLMS YYVFSNNIYVWRSIICLYFLVLMIYSKTKYKKIIFIGLGLLFHYTFILFLCVYYFCRVNK IGKFKFVIVSIIISFIISNFLYWMSYASLFVSGGELSLFMSQDNEALKRLIISGTFLFLL LMINLESETNNWVLYKLSLFFCILSIFLCDNWQLSWRVFVPAAILGTAIILSNIKKKDSV VLLGITLSIIPTFRLIFNLLILGHP
Trembl: Q8VQ45
Literature
  • First Author: Kenne, L. "Structural studies of the O-antigens from Salmonella greenside and Salmonella adelaide". Carbohydrate Research. 111(2). (1983), pp 289-96 PubMed: [6339053]
  • First Author: Lindberg, B. "Structural studies of the O-specific side-chain of the lipopolysaccharide from Escherichia coli O 55". Carbohydrate Research. 97(1). (1981), pp 105-112 PubMed: [7030487]
  • First Author: Wang, L. "The O-antigen gene cluster of Escherichia coli O55:H7 and identification of a new UDP-GlcNAc C4 epimerase gene". Journal of Bacteriology. 184(10. (2002), pp 2620-2625 PubMed: [11976290]