O-Antigen Description

Serogroup:O107
Serotype H:
Serotype K:
Strain:
Structure:
->4)bDGalNAc(1->3)aLRha(1->4)aDGlcNAc(1->4)bDGal(1->3)aDGalNAc(1->
Comment:- Structure [1]
GTs
GT nameDonorAcceptorPosition | Link.NumSimilar to
WclW

bDGalNAc(1->

GT NameDonorAcceptorScore / e-value
O117-WbeA


539 / 0.0
O113-WbnA


92 / 2e-23
O185-O185_09


90 / 9e-23
O128-WbsK

bDGalNAc(1->

->4)aDGal

85 / 4e-21
O112-WfeM


83 / 2e-20
O42-WbeX

bDGlcNAc(1->

->3)bDGalf

82 / 6e-20
O124-WfeS


82 / 8e-20
O164-WfeS


82 / 8e-20
O28-WbeX

bDGlcNAc(1->

->3)bDGalf

82 / 5e-20
O38-O038_09


82 / 3e-20
O173-WcmW

bDGlc(1->

->3)bDGlcNAc

81 / 6e-20
O30-O030_06


81 / 7e-20
O12-O012_O2


81 / 2e-19
O115-WegI


80 / 3e-19
ncbi CAZy
- Reference [1]
GT nameDonorAcceptorPosition | Link.NumSimilar to
WclX

aLRha(1->

->4)aDGlcNAc

2 | 3
GT NameDonorAcceptorScore / e-value
O117-WbeB

aLRha(1->

->4)aDGlc

632 / 0.0
O18-wekT


143 / 2e-41
O142-O142_10


130 / 7e-37
O34-O034_10


120 / 6e-33
O4-WbuG

aLRha(1->

->6)aDGlc

117 / 4e-32
O180-wfcT


111 / 6e-30
O97-O097_05


107 / 3e-28
O51-O051_11


96 / 6e-25
O154-O154_14


89 / 3e-22
O10-O010_11


84 / 3e-20
O100-O100_10


83 / 5e-20
ncbi CAZy
- Reference [1]
GT nameDonorAcceptorPosition | Link.NumSimilar to
WclY

GT NameDonorAcceptorScore / e-value
O117-WbeC


663 / 0.0
O48-O048_07


152 / 3e-44
O112-WfeK


149 / 7e-43
O119-WekI


148 / 1e-42
ncbi CAZy
- Reference [1]
GT nameDonorAcceptorPosition | Link.NumSimilar to
WclZ

bDGal(1->

->3)aDGalNAc

4 | 1
GT NameDonorAcceptorScore / e-value
O117-WbeD

bDGal(1->

->3)aDGalNAc

556 / 0.0
O70-O070_13


268 / 1e-90
O155-WclG


267 / 3e-90
O71-WdaK

bDGal(1->

->3)aDGalNAc

243 / 1e-80
O37-O037_13


236 / 8e-78
O178-O178_09


232 / 2e-76
O153-O153_06


232 / 2e-76
O104-WbwC

bDGal(1->

->3)bDGalNAc

231 / 4e-76
O174-WbcZ


229 / 2e-75
O5-O05_15


224 / 1e-73
O171-O171_13


220 / 6e-72
O7-WbbD

bDGal(1->

->3)aDGlcNAc

217 / 2e-70
O160-O160_08


207 / 1e-66
O112-WfeJ


206 / 2e-66
O131-O131_11


205 / 4e-66
O185-O185_03


194 / 1e-61
O33-O033_09


194 / 2e-61
O146-WbwW


190 / 4e-60
O65-O065_13


177 / 2e-55
O28-O028ab_02


127 / 3e-36
O63-WbuP


120 / 7e-34
O54-O054_06


114 / 3e-31
O64-O064_03


108 / 2e-29
O74-O074_09


107 / 8e-29
O114-WbuP

bDGal(1->

->3)aDGlcNAc

99 / 8e-26
O92-O092_07


84 / 8e-21
O167-WfdH


82 / 8e-20
ncbi CAZy
- Reference [1]
NMR
1H-NMR4.69 4.01 3.83 4.02 3.74 3.70 4.90 4.18 3.84 3.52 4.02 1.24 4.87 3.93 3.85 3.68 4.25 3.75 3.75 4.58 3.55 3.72 3.97 3.74 3.74 3.74 4.93 4.43 4.21 4.28 4.45 3.70 3.72
Solvent: D2O
Temp: 30C
pD: 0
Ref: Acetone 2.225 ppm
Comment:
13C-NMR105.00 54.10 70.70 77.40 76.80 61.60 101.90 71.80 81.40 72.20 70.80 17.90 99.90 55.60 70.90 78.90 72.50 61.20 106.30 71.90 73.40 78.70 76.60 61.70 100.20 50.30 78.10 70.00 71.70 61.60
Solvent: D2O
Temp: 30C
pD: 0
Ref: Acetone 31.45 ppm
Comment:
Enzymes
FlippaseMENKKNHIYGIVNNIIVMLSPIIIIPFAIKNVGIDEYGYFVQVNIIYSCLISIFTASLSGYFIKSYLEKK LSFHDIFIIQLFINLFSTAIIGIYILLRFDVVAPYIFVVAMLTNTLNFEWFFHAIGAQKQLLIRNLIIKT MFVIIAIFILEVYKNIAVYFVIFGLNIIIANFLLGIYSFTKIKNKEYILFSNGRGGNRLFCFIKDAKFFF LSPTIGAVYQYGDQILVSLLFPKTALVFINLAKQIIGASVMVSGTLCRVEQKNIFSSEKIERLTKIKKTL MAYVFYLMTTSILIILIGPLILGMLIKETVSLGLNYYILIAGIYVFTSLSIFIDYIIGLTFRTEHYTSIS NICCATIVTLLNAMFLEKYGATFSLFSLFIGELLVFILLSTMHYINIKRRTYYNG
Trembl: B8QSJ6
PolymeraseMVNILLCINIIILLICICIYLIALKSKKAPRLFALYLGAFILFIESHIILAITTSFNFGTSEWFFNGEFD YNTKTEVITSINLFIIGMILGSVFIASTITYKSSSYDVTFENKSIARFSWLLLVSILPFVVVYLINLIAF ISSNGFYSLYINGNKISGGYILDLFFLTLYSLLISLKNKKKILFIILCVACVYLFIGTRLEFMFKVFPVL IYYILISKNIHKYFRLKNILAISILFWGLIFSMQYSVSARDNIEMGSNIITTFLKQQGVSVNVIGIAIKD KNNSLLSESVILSPLYDSAISLANSLVGVQSNGNSVEFAENSFSLSHKLSYLEDPSAYLAGYGVGGAAIA ELYIVGGYLACLIGGMLTYIFISILEKIAKKSFFNFIFVMLITGKILYSPRGEFLSFMSADRMLILFLIF TFSYKFLLATSNKKMSFKNE
Trembl: B8QSJ7
Literature
  • First Author: Wang, Q. "Genetic and structural analyses of Escherichia coli O107 and O117 O-antigens". FEMS Immunol. Med. Microbiol.. 55(1). (2009), pp 47-54 PubMed: [19040662]