O-Antigen Description

Serogroup:	O54
Serotype H:
Serotype K:
Strain:
Structure:	->4)aDGalA(1->2)aLRha(1->2)bDRibf(1->4)bDGal(1->3)bDGlcNAc(1->
Comment:

GTs

GT name

Donor

Acceptor

Position | Link.Num

Similar to

O054_06

bDGal(1->

->4)aDGal

GT Name	Donor	Acceptor	Score / e-value
O63-WbuP			246 / 8e-82
O114-WbuP	bDGal(1->	->3)aDGlcNAc	239 / 5e-79
O64-O064_03			235 / 9e-78
O92-O092_07			187 / 6e-59
O74-O074_09			170 / 2e-52
O160-O160_08			124 / 6e-35
O65-O065_13			120 / 8e-34
O107-WclZ	bDGal(1->	->3)aDGalNAc	114 / 3e-31
O171-O171_13			113 / 6e-31
O117-WbeD	bDGal(1->	->3)aDGalNAc	111 / 2e-30
O104-WbwC	bDGal(1->	->3)bDGalNAc	109 / 1e-29
O33-O033_09			108 / 3e-29
O146-WbwW			107 / 5e-29
O185-O185_03			107 / 6e-29
O167-WfdH			105 / 3e-28
O71-WdaK	bDGal(1->	->3)aDGalNAc	104 / 6e-28
O112-WfeJ			103 / 1e-27
O5-O05_15			103 / 2e-27
O37-O037_13			102 / 4e-27
O174-WbcZ			101 / 1e-26
O70-O070_13			101 / 7e-27
O128-WbsK	bDGalNAc(1->	->4)aDGal	99 / 8e-26
O127-WbiP			95 / 1e-24
O90-O090_13			95 / 1e-24
O7-WbbD	bDGal(1->	->3)aDGlcNAc	94 / 4e-24
O178-O178_09			93 / 7e-24
O153-O153_06			93 / 7e-24
O55-WbgO			92 / 2e-23
O155-WclG			92 / 2e-23
O55-WbgO			92 / 2e-23
O86-WbnJ	bDGal(1->	->3)aDGalNAc	91 / 3e-23
O23-O023_06			91 / 3e-23
O86-WbwJ			89 / 1e-22
O86-WcmC	bDGal(1->	->3)aDGalNAc	89 / 2e-22
O28-O028ab_02			89 / 2e-22
O125-O125_04			87 / 1e-21
O131-O131_11			83 / 2e-20
O5-O05_12			81 / 1e-19

ncbi CAZy

- Reference [1]

GT name

Donor

Acceptor

Position | Link.Num

Similar to

O054_07

GT Name	Donor	Acceptor	Score / e-value
O35-WcnX			126 / 3e-36
O120-O120_13			95 / 1e-24
O105-WbsV			92 / 9e-24

ncbi CAZy

- Reference [1]

GT name

Donor

Acceptor

Position | Link.Num

Similar to

O054_10

aLRha(1->

->4)bDGal

GT Name	Donor	Acceptor	Score / e-value
O146-WbwV			214 / 6e-69
O133-O133_07	aLRha(1->	->2)aLRha ->4)aDGalA	150 / 2e-44
O147-WfbY			146 / 5e-43
O120-O120_14			140 / 1e-40
O19-O019_09			136 / 4e-39
O69-O069_11			135 / 1e-38
O10-O010_09			132 / 1e-37
O148-WbbQ			131 / 2e-37
O19-O019_08			130 / 5e-37
O35-WcnY			125 / 3e-35
O129-RfbF			124 / 9e-35
O135-RfbF			124 / 1e-34
O13-RfbF			124 / 9e-35
O150-WfgI			123 / 2e-34
O71-WdaM	aLRha(1->	->4)bDGal	107 / 1e-28
O2-wegQ	aLRha(1->	->3)aLRha ->2)aLRha	105 / 4e-28
O50-O050_12			105 / 4e-28

ncbi CAZy

- Reference [1]

NMR
1H-NMR		5.05 3.72 4.05 4.42 4.88 5.07 4.07 3.89 3.47 3.77 1.30 5.44 4.22 4.24 4.01 3.66 3.83 4.44 3.50 3.74 3.99 3.71 3.73 3.73 4.70 3.80 3.78 3.52 3.38 3.73 3.86
Solvent:	D2O
Temp:	40C
pD:
Ref:	TSP 0.0 ppm
Comment:
13C-NMR		99.3 69.4 70.4 80.0 72.1 174.5 99.7 77.7 70.6 73.2 70.7 17.8 108.1 82.2 71.3 83.9 63.8 104.7 72.1 74.1 76.8 76.0 62.5 103.1 56.1 83.6 69.9 76.3 62.3
Solvent:	D2O
Temp:	40C
pD:
Ref:	TSP -1.6 ppm
Comment:

Literature
First Author: O I Naumenko. "Structure and gene cluster of the O-antigen of Escherichia coli O54". Carbohydrate Research. 34-38. (2018), pp 34-38 PubMed: [29660546]

bDGal(1->

->4)aDGal

bDGal(1->

->3)aDGlcNAc

bDGal(1->

->3)aDGalNAc

bDGal(1->

->3)aDGalNAc

bDGal(1->

->3)bDGalNAc

bDGal(1->

->3)aDGalNAc

bDGalNAc(1->

->4)aDGal

bDGal(1->

->3)aDGlcNAc

bDGal(1->

->3)aDGalNAc

bDGal(1->

->3)aDGalNAc

aLRha(1->

->4)bDGal

aLRha(1->

->2)aLRha ->4)aDGalA

aLRha(1->

->4)bDGal

aLRha(1->

->3)aLRha ->2)aLRha

->2)aLRha
->4)aDGalA

->3)aLRha
->2)aLRha