O-Antigen Description

Serogroup:	O79
Serotype H:
Serotype K:
Strain:	G4218
Structure:	aLRha(1->3) \| ->2)bDGal(1->4)bDMan6Ac(1->3)bDMan(1->4)bDGlcA(1->3)aDGlcNAc(1->
Comment:	- Structure [2]

GTs

GT name

Donor

Acceptor

Position | Link.Num

Similar to

WbdT

ncbi CAZy

- Reference [1]

GT name

Donor

Acceptor

Position | Link.Num

Similar to

WbdU

ncbi CAZy

- Reference [1]

GT name

Donor

Acceptor

Position | Link.Num

Similar to

WbdV

ncbi CAZy

- Reference [1]

GT name

Donor

Acceptor

Position | Link.Num

Similar to

WbdW

ncbi CAZy

- Reference [1]

GT name

Donor

Acceptor

Position | Link.Num

Similar to

WbdX

bDGlcA(1->

GT Name	Donor	Acceptor	Score / e-value
O93-O093_02			262 / 9e-89
O182-O182_10			258 / 3e-87
O161-weiG	bDGlcA(1->	->3)bDGlcNAc	256 / 3e-86
O30-O030_06			247 / 5e-83
O91-WbsA			236 / 1e-78
O140-O140_14			182 / 1e-57
O143-WfdV			178 / 9e-56
O38-O038_09			170 / 5e-53
O112-WfeI			152 / 3e-46
O152-WfgD	bDGlc(1->	->3)bDGlcNAc	145 / 2e-43
O81-O081_11			142 / 6e-42
O165-WcnW			139 / 5e-41
O82-O082_09			135 / 1e-39
O46-O046_08			124 / 2e-35
O134-O134_08			122 / 9e-35
O102-WelO	bDGlc(1->	->3)bDGalNAc	121 / 2e-34
O27-WejU			120 / 7e-34
O173-WcmW	bDGlc(1->	->3)bDGlcNAc	117 / 9e-33
O130-WffJ			114 / 1e-31
O157-WbdN			114 / 7e-32
O24-WfaM	bDGlc(1->	->3)bDGalNAc	112 / 5e-31
O61-WeiL			106 / 7e-29
O56-WfaP	bDGlc(1->	->3)bDGlcNAc	96 / 4e-25
O21-WclQ			95 / 9e-25
O55-WbgP			84 / 6e-21
O55-WbgP			84 / 5e-21

ncbi CAZy

- Reference [1]

Non-Sugar Components
- Acetate

Enzymes
Flippase		MRAGAIVFLRNLLIAVSGFILVSKGVKNLSEADTAFLLLVMLVINAQNALYEGLFLVHTMSFKDKCARTI LKRQNKIQVLIPVLAIIFVLIYSNTVLDISIGYGYVALLYFCFYGNILSISVVNVFCSIRGFTWCFILDI VFTTAFIILSVTYSSRIILILALLLRVGGSAFAGLIFQVRYKKSNDKKLLSLPLYSMGYFSGTLLSLFRD TLSPLLIGWFVGPSILIAIRIFNTCYSAPGLFASALNKIIVRYARKKQSAKKVFITYLIGLYVLSIGYLL IWYIGGERLYLLLFGKTQYFPQTIFLYSISLFCLFWPLGQTAITGMIFTGSSRLFFIVSIIWTFVSAICI FILFIYGIEFYMLAIAFSQMLNILIVYLVRKNETII
Trembl:	B5L371
Polymerase		MRVFLYVLILYLSVWITNEYSILSFPIEFNFLYPLPQILLLSFVYAFITRAKKKSHQVDILEWVIPITKL SIVLSLIVLIITLPANGRDAKLEIISNNIVLYYLNMFNSSMLIVMLSSMFQPCRSIVNKKVFFYIIFAII AFSLTNLSRSMAFYFIIAICMSGLKFDIEKKKIISWGMVLIVVMILMPIFQGRTDNVEGALARSILNIVF YVSYSFGLGEYLIKETHLSGISWGYFGYVLSKILNEPLTFNIFFDNKYLYEFIQLGKSDIYGLLNANVMY PLWATVYADFGLFSFIPYLFTFFIIVTSYFMRAYILFSWLFFRFAILGFLVSPVLFRDIVFEIVVVVAFE IFIRKNKRICVDE
Trembl:	B5L369

Literature
First Author: Liu, B. "Structure and genetics of Shigella O antigens". FEMS Microbiology. 32. (2008), pp 627-653 PubMed: [18422615]
First Author: Knirel YA. "Structural Relationships Between Genetically Closely Related O-Antigens of Escherichia coli and Shigella spp.". Biochemistry (Mosc). 81. (2016), pp 600-608 PubMed: [27301288]